📚 Tools and databases for analyzing HLA and VDJ genes.
Accurate Typing of Diverse Immune-Related Gene Families from Long-Read Sequencing Data. It can handle HLA, KIR, IG, TCR, CYP gene families. It supports both WGS and amplicon data. It supports PacBio and Nanopore data.
An R package to analyze single-cell V(D)J data
Generation probability, diversity, and simulation for AIRR-seq TCR/BCR repertoires, from graph models of decomposed receptor sequences. Python, C-accelerated.
🧽 Estimate sequencing saturation for GEX, VDJ, and ADT data from the 10x Genomics platform.
Construction of IHGV sequences from RNA-seq
A three-part R tutorial for single-cell BCR sequence processing and integration with gene expression data, using Immcantation and Seurat
VirtualDJ — это популярное программное обеспечение для сведение музыки, создания миксов и проведения живых диджейских сетов. Приложение предлагает интуитивный интерфейс с двумя или четырьмя деками, встроенные эффекты, автосинхронизацию темпа и подгонку тональности, что делает его отличным выбором как для новичков, так и для профи.
Run various bioinformatics software for classifying the immune repertoire from bulk RNAseq
V(D)J T Cell and B Cell Analysis with cellranger vdj
Tool to analyze and visualize scRNA-Seq data with focus on 10x VDJ assay.
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